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Genomatix ChipInspector

Details

Size:	56.2 MB
Last Update:	2008-05-18 00:26:27
Version:	1.40
OS Support:	Windows All
License/Program Type:	Freeware
Publisher:	Genomatix Software GmbH
Price:	$0.00
Screenshot:	Genomatix ChipInspector Screenshots

Genomatix ChipInspector lets you discover the real power of your microarray data.
ChipInspector will extract the significant information right from the expression level of single probes from microarrays.
The sophisticated analysis techniques and the state-of-the-art genomic knowledge dramatically increase the number of significant features while simultaneously reducing false positive rates by an order of magnitude.
ChipInspector has been shown to deliver useful results even from several years old formalin-fixed paraffin-embedded prostate cancer specimens, as shown in the Nature Group Publication.
ChipInspector uses the world's largest database of alternative transcripts and promoters to achieve superior signal-noise ratios in microarray analysis. It is unique in removing statistical and gene calling errors right at single probe level. This technology offers the basis for unmatched accuracy in significance analysis of the microarray data.
Features:
-uses single probe expression levels as input
-reduces false positive rates by about an order of magnitude
-eliminates normalization/interpolation problems
-increases the number of significant features
-supports Affymetrix CEL files (other platforms possible)
-assigns probes correctly to transcripts and genes
-accounts for alternative transcripts
-direct transcript view with probe mapping
-applies state-of-the-art genomic knowledge
-extracts new information by mining previous microarray experiments
- 8 out of 10
Requirements:
- Java 1.5.0 or higher
- Internet connection
- 2 GB main memory (RAM)
- 4 GB for tiling arrays
- 2 GB available hard disk space

Downloadtube.com Editor Final Note:

The microarray analysis is a field well-covered by this tool's powerful features.

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